SNP Report

Basic Info

Name	rs61740631 dbSNP Ensembl
Location	chr16:20682341 - 20682341(1)
Variant Alleles	C/G
Ancestral Allele	C
Minor Allele	G
Minor Allele Frequence	0.00698882
Functional Annotation	downstream_gene_variant; intron_variant; missense_variant; NMD_transcript_variant; non_coding_transcript_variant. Polyphen Annotation: probably damaging(ENST00000307493, ENST00000519745, ENST00000520010) SIFT Annotation: deleterious(ENST00000307493, ENST00000519745, ENST00000520010)
Consequence to Transcript	downstream_gene_variant(ENST00000523065, ENST00000614721); intron_variant(ENST00000501740, ENST00000561584, ENST00000568235); missense_variant(ENST00000307493, ENST00000519745, ENST00000520010); NMD_transcript_variant(ENST00000519745); non_coding_transcript_variant(ENST00000501740)
No. of Studies	1 (Positive: 0; Negative: 0; Trend: 1)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Georgi, B., 2014	C/G		GERP=3.96 GERP=3.96	Putative damaging exonic variants found in the five linkage ...... Putative damaging exonic variants found in the five linkage regions. More...	Trend

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
ACSM1	acyl-CoA synthetase medium-chain family member 1	16p12.3	1(0/0/1)
ACSM3	acyl-CoA synthetase medium-chain family member 3	16p13.11	Mapped by Literature SNP

SNPs in LD with rs61740631 (count: 0) View in gBrowse (chr16:20682341..20682341 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)