SNP Report

Basic Info

Name	rs617040 dbSNP Ensembl
Location	chr18:10549365 - 10549365(1)
Variant Alleles	C/A
Ancestral Allele	A
Minor Allele	C
Minor Allele Frequence	0.362819
Functional Annotation	intron_variant; NMD_transcript_variant; non_coding_transcript_variant.
Consequence to Transcript	intron_variant(ENST00000322897, ENST00000580224, ENST00000580483, ENST00000583367); NMD_transcript_variant(ENST00000580224, ENST00000580483); non_coding_transcript_variant(ENST00000583367)
No. of Studies	1 (Positive: 0; Negative: 1; Trend: 0)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Weller, A. E., 2006	A/C		genotypic P-value = 0.188, allelic P-value = 0.47 genotypic P-value = 0.188, allelic P-value = 0.47		Negative

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
NAPG	N-ethylmaleimide-sensitive factor attachment protein, gamma	18p11.21	3(2/1/0)

SNPs in LD with rs617040 (count: 0) View in gBrowse (chr18:10549365..10549365 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)