SNP Report

Basic Info

Name	rs60681475 dbSNP Ensembl
Location	chr16:48170219 - 48170219(1)
Variant Alleles	C/T
Ancestral Allele	C
Minor Allele	T
Minor Allele Frequence	0.00579073
Functional Annotation	intron_variant; non_coding_transcript_variant; splice_acceptor_variant; upstream_gene_variant.
Consequence to Transcript	intron_variant(ENST00000353782); non_coding_transcript_variant(ENST00000565329); splice_acceptor_variant(ENST00000356608, ENST00000394747, ENST00000394748, ENST00000565329); upstream_gene_variant(ENST00000563906)
No. of Studies	1 (Positive: 0; Negative: 0; Trend: 1)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Georgi, B., 2014	C/T		7 in BPI, 4 in Well 7 in BPI, 4 in Well	Top 30 Amish-specific putative damaging exonic missense vari...... Top 30 Amish-specific putative damaging exonic missense variants by prevalence in affected individuals. More...	Trend

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
ABCC11	ATP-binding cassette, sub-family C (CFTR/MRP), member 11	16q12	1(0/0/1)

SNPs in LD with rs60681475 (count: 0) View in gBrowse (chr16:48170219..48170219 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)