BDgene

SNP Report

Basic Info
Name rs5742629 dbSNP Ensembl
Location chr12:102463485 - 102463485(1)
Variant Alleles T/C
Ancestral Allele C
Minor Allele C
Minor Allele Frequence 0.343251
Functional Annotation intron_variant; non_coding_transcript_exon_variant; non_coding_transcript_variant.
Consequence to Transcript intron_variant(ENST00000307046, ENST00000337514, ENST00000392904, ENST00000392905, ENST00000424202, ENST00000456098); non_coding_transcript_exon_variant(ENST00000635615); non_coding_transcript_variant(ENST00000635615)
No. of Studies 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
IGF1 insulin-like growth factor 1 (somatomedin C) 12q23.2 1(1/0/0)

SNPs in LD with rs5742629 (count: 0) View in gBrowse (chr12:102463485..102463485 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)