BDgene

SNP Report

Basic Info
Name rs552792 dbSNP Ensembl
Location chr4:55380106 - 55380106(1)
Variant Alleles T/C
Ancestral Allele C
Minor Allele C
Minor Allele Frequence 0.345847
Functional Annotation downstream_gene_variant; intron_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript downstream_gene_variant(ENST00000601433); intron_variant(ENST00000433175, ENST00000510637, ENST00000591915, ENST00000592823, ENST00000595103, ENST00000595734, ENST00000596289, ENST00000596312, ENST00000598906, ENST00000599135, ENST00000608265, ENST00000608558, ENST00000609051, ENST00000609487, ENST00000609500, ENST00000609573, ENST00000609580, ENST00000609700, ENST00000610396, ENST00000613794, ENST00000619203, ENST00000619912); non_coding_transcript_variant(ENST00000433175, ENST00000510637, ENST00000591915, ENST00000592823, ENST00000595103, ENST00000595734, ENST00000596289, ENST00000596312, ENST00000598906, ENST00000599135, ENST00000608265, ENST00000608558, ENST00000609051, ENST00000609487, ENST00000609500, ENST00000609573, ENST00000609580, ENST00000609700, ENST00000610396, ENST00000613794, ENST00000619203, ENST00000619912); upstream_gene_variant(ENST00000608086, ENST00000619685)
No. of Studies 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
SRD5A3-AS1 SRD5A3 antisense RNA 1 4q12 Mapped by LD-proxy

SNPs in LD with rs552792 (count: 0) View in gBrowse (chr4:55380106..55380106 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)