SNP Report

Basic Info

Name	rs549564 dbSNP Ensembl
Location	chr4:55420550 - 55420550(1)
Variant Alleles	T/C
Ancestral Allele	C
Minor Allele	T
Minor Allele Frequence	0.101837
Functional Annotation	downstream_gene_variant; intron_variant; NMD_transcript_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000511710); intron_variant(ENST00000381334, ENST00000506103, ENST00000506198, ENST00000508404, ENST00000508561, ENST00000509575, ENST00000514904, ENST00000608091); NMD_transcript_variant(ENST00000506103, ENST00000508404); non_coding_transcript_variant(ENST00000508561, ENST00000509575, ENST00000514904); upstream_gene_variant(ENST00000515591)
No. of Studies	0 (Positive: 0; Negative: 0; Trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
TMEM165	transmembrane protein 165	4q12	Mapped by Literature SNP

SNPs in LD with rs549564 (count: 0) View in gBrowse (chr4:55420550..55420550 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)