SNP Report

Basic Info

Name	rs521977 dbSNP Ensembl
Location	chrCHR_HSCHR6_MHC_SSTO_CTG1:31861738 - 31861738(1)
Variant Alleles	G/T
Ancestral Allele	T
Minor Allele	T
Minor Allele Frequence	0.149161
Functional Annotation	downstream_gene_variant; intron_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000475563); intron_variant(ENST00000229729, ENST00000375562, ENST00000414427, ENST00000479777, ENST00000544672); non_coding_transcript_variant(ENST00000479777); upstream_gene_variant(ENST00000487680, ENST00000484190, ENST00000414684, ENST00000417894, ENST00000488616, ENST00000550401, ENST00000550821, ENST00000488616, ENST00000487052, ENST00000491622, ENST00000433046, ENST00000453831, ENST00000474603, ENST00000546461, ENST00000551168, ENST00000474603, ENST00000497541, ENST00000467656, ENST00000425238, ENST00000431710, ENST00000463524, ENST00000548188, ENST00000549663, ENST00000463524, ENST00000479497, ENST00000481664, ENST00000415517, ENST00000441920, ENST00000460693, ENST00000547288, ENST00000547493, ENST00000460693, ENST00000459749, ENST00000486317, ENST00000383379, ENST00000458130, ENST00000489833, ENST00000494147, ENST00000547684, ENST00000549677, ENST00000489833, ENST00000494147, ENST00000494162, ENST00000442152, ENST00000450933, ENST00000460923, ENST00000553121, ENST00000553147, ENST00000460923, ENST00000492379)
No. of Studies	0 (Positive: 0; Negative: 0; Trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
SLC44A4	solute carrier family 44, member 4	6p21.3	Mapped by Literature SNP

SNPs in LD with rs521977 (count: 0) View in gBrowse (chrCHR_HSCHR6_MHC_SSTO_CTG1:31861738..31861738 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)