SNP Report

Basic Info

Name	rs4948418 dbSNP Ensembl
Location	chr10:60425736 - 60425736(1)
Variant Alleles	C/T
Ancestral Allele	T
Minor Allele	T
Minor Allele Frequence	0.1252
Functional Annotation	intron_variant; NMD_transcript_variant.
Consequence to Transcript	intron_variant(ENST00000373827, ENST00000503366, ENST00000622427); NMD_transcript_variant(ENST00000622427)
No. of Studies	1 (Positive: 1; Negative: 0; Trend: 0)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Chen, D. T.,2011		T	Meta-analysis results by ancestry: European and Asian-ancest...... Meta-analysis results by ancestry: European and Asian-ancestry phase I samples: Fixed effects P-value = 8.93E-09, Random effects P-value = 3.71EC10, I²=80.77, Q test=26.01, Q test P-value = 8.90E-05; European-ancestry phase I and phase II samples: Fixed effects P-value = 2.45E-08, Random effects P-value = 2.99EC10, I²=82.87, Q test=23.35, Q test P-value = 1.08E-04 More...	Supportive evidence for prior association findings near ANK3...... Supportive evidence for prior association findings near ANK3 was also observed. More...	Positive

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
ANK3	ankyrin 3, node of Ranvier (ankyrin G)	10q21	17(13/3/1)

SNPs in LD with rs4948418 (count: 0) View in gBrowse (chr10:60425736..60425736 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)