BDgene

SNP Report

Basic Info
Name rs4862650 dbSNP Ensembl
Location chr4:186153679 - 186153679(1)
Variant Alleles A/G
Ancestral Allele G
Minor Allele A
Minor Allele Frequence 0.120208
Functional Annotation downstream_gene_variant; missense_variant; non_coding_transcript_exon_variant; non_coding_transcript_variant; upstream_gene_variant.
Polyphen Annotation: benign(ENST00000227065, ENST00000356371, ENST00000389354, ENST00000502970, ENST00000503432, ENST00000504330, ENST00000510790, ENST00000514153)
SIFT Annotation: tolerated(ENST00000227065, ENST00000356371, ENST00000389354, ENST00000502970, ENST00000503432, ENST00000504330, ENST00000510790, ENST00000514153)
Consequence to Transcript downstream_gene_variant(ENST00000508379, ENST00000509574, ENST00000513212); missense_variant(ENST00000227065, ENST00000356371, ENST00000389354, ENST00000502970, ENST00000503432, ENST00000504330, ENST00000510790, ENST00000514153); non_coding_transcript_exon_variant(ENST00000513030, ENST00000514829, ENST00000515078); non_coding_transcript_variant(ENST00000513030, ENST00000514829, ENST00000515078); upstream_gene_variant(ENST00000504462)
No. of Studies 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
FAM149A family with sequence similarity 149, member A 4q35.1 1(0/1/0)

SNPs in LD with rs4862650 (count: 0) View in gBrowse (chr4:186153679..186153679 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)