SNP Report

Basic Info

Name	rs4713902 dbSNP Ensembl
Location	chr6:35646249 - 35646249(1)
Variant Alleles	T/C
Ancestral Allele	T
Minor Allele	C
Minor Allele Frequence	0.197085
Functional Annotation	intron_variant.
Consequence to Transcript	intron_variant(ENST00000357266, ENST00000536438, ENST00000539068, ENST00000542713)
No. of Studies	2 (Positive: 1; Negative: 1; Trend: 0)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 2)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Willour, V. L.,2009	T/C		FBAT: Additive model: major allele P-value = 0.0001, minor a...... FBAT: Additive model: major allele P-value = 0.0001, minor allele P-value = 0.0001; Dominant model: major allele P-value = 0.019, minor allele P-value = 0.0007; Genotypic association: TDT P-value = 0.001 More...	It showed a significant overtransmission of the major allele...... It showed a significant overtransmission of the major allele under both the additive model and the dominant model and a significant association in TDT result. More...	Positive
Ceulemans, S.,2011	C/T		Single SNP analyses: Permuted P-value = 0.5859, Odds Ratio=1...... Single SNP analyses: Permuted P-value = 0.5859, Odds Ratio=1.075 More...	No significant association was observed. No significant association was observed.	Negative

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
FKBP5	FK506 binding protein 5	6p21.31	5(1/4/0)

SNPs in LD with rs4713902 (count: 0) View in gBrowse (chr6:35646249..35646249 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)