BDgene

SNP Report

Basic Info
Name rs4512342 dbSNP Ensembl
Location chr8:32750356 - 32750356(1)
Variant Alleles T/G
Ancestral Allele G
Minor Allele G
Minor Allele Frequence 0.188698
Functional Annotation intron_variant; non_coding_transcript_variant.
Consequence to Transcript intron_variant(ENST00000287842, ENST00000356819, ENST00000405005, ENST00000518084, ENST00000518104, ENST00000519240, ENST00000519301, ENST00000521670, ENST00000522402, ENST00000522569, ENST00000523079, ENST00000523534, ENST00000523681, ENST00000539990); non_coding_transcript_variant(ENST00000522569, ENST00000523681)
No. of Studies 1 (Positive: 0; Negative: 1; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Wen, Z., 2016 G/T P-value=0.803, OR=1.015, 95%CI=0.904-1.139 P-value=0.803, OR=1.015, 95%CI=0.904-1.139 We also identified association between rs2439281, rs11989919...... We also identified association between rs2439281, rs11989919, rs7829383, rs2919375, rs4512342, and bipolar disorder before Bonferroni correction, but no association remained after the correction. More... Negative

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
NRG1 neuregulin 1 8p12 15(10/5/0)

SNPs in LD with rs4512342 (count: 0) View in gBrowse (chr8:32750356..32750356 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)