SNP Report

Basic Info

Name	rs4140862 dbSNP Ensembl
Location	chr12:5595718 - 5595718(1)
Variant Alleles	C/A
Ancestral Allele	C
Minor Allele	A
Minor Allele Frequence	0.260184
Functional Annotation	intron_variant.
Consequence to Transcript	intron_variant(ENST00000327087, ENST00000356134, ENST00000546188)
No. of Studies	1 (Positive: 0; Negative: 1; Trend: 0)
Source	Literature
Overlap with SZ?	YES
Overlap with MDD?	YES

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Huang, J.,2010	A/C		Omnibus GWAS Test: P-value > 5E-05 Omnibus GWAS Test: P-value > 5E-05	No significant association was observed in BD. No significant association was observed in BD.	Negative

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
ANO2	anoctamin 2, calcium activated chloride channel	12p13.3	1(0/1/0)

SNPs in LD with rs4140862 (count: 0) View in gBrowse (chr12:5595718..5595718 )

Overlap with SZ from cross-disorder studies (count: 1)

Reference	Statistical Result	Description	Result Category
Huang, J.,2010	Omnibus GWAS Test:P-value > 5E-05	No significant association was observed.	Negative

Overlap with MDD from cross-disorder studies (count: 1)

Reference	Statistical Result	Description	Result Category
Huang, J.,2010	Omnibus GWAS Test:P-value > 5E-05	No significant association was observed.	Negative