SNP Report

Basic Info

Name	rs3996329 dbSNP Ensembl
Location	chr7:1979235 - 1979235(1)
Variant Alleles	G/A
Ancestral Allele	G
Minor Allele	A
Minor Allele Frequence	0.145767
Functional Annotation	downstream_gene_variant; intron_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000444373); intron_variant(ENST00000265854, ENST00000399654, ENST00000402746, ENST00000406869, ENST00000438959, ENST00000450235)
No. of Studies	1 (Positive: 0; Negative: 1; Trend: 0)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Cichon, S.,2011		T	For GWAS, P-value = 0.0000132, OR=1.45, for Replication I, P...... For GWAS, P-value = 0.0000132, OR=1.45, for Replication I, P-value = 0.1124, OR=1.09, for combined sample(GWAS+Replication I), P-value = 0.000172, OR=1.19 More...	No significant association was observed. No significant association was observed.	Negative

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
MAD1L1	MAD1 mitotic arrest deficient-like 1 (yeast)	7p22	5(1/2/2)

SNPs in LD with rs3996329 (count: 0) View in gBrowse (chr7:1979235..1979235 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)