BDgene

SNP Report

Basic Info
Name rs3923310 dbSNP Ensembl
Location chr17:80540653 - 80540653(1)
Variant Alleles G/A
Ancestral Allele G
Minor Allele G
Minor Allele Frequence 0.445487
Functional Annotation upstream_gene_variant.
Consequence to Transcript upstream_gene_variant(ENST00000306801, ENST00000471666, ENST00000544334, ENST00000570891, ENST00000574767, ENST00000577161)
No. of Studies 1 (Positive: 1; Negative: 0; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Rajkumar, A. P., 2014 OR = 1.061; p = 0.0195 OR = 1.061; p = 0.0195 Significant association was observed. Significant association was observed. Positive

SNP related genes (count: 2)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
RPTOR regulatory associated protein of MTOR, complex 1 17q25.3 2(1/1/0)
RPL32P31 ribosomal protein L32 pseudogene 31 17q25.3 Mapped by Literature SNP

SNPs in LD with rs3923310 (count: 0) View in gBrowse (chr17:80540653..80540653 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)