BDgene

SNP Report

Basic Info
Name rs3905219 dbSNP Ensembl
Location chr6:37641529 - 37641529(1)
Variant Alleles T/C
Ancestral Allele C
Minor Allele T
Minor Allele Frequence 0.452276
Functional Annotation downstream_gene_variant; intron_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript downstream_gene_variant(ENST00000502298, ENST00000510077); intron_variant(ENST00000418178, ENST00000434837, ENST00000503419, ENST00000505425); non_coding_transcript_variant(ENST00000503419); upstream_gene_variant(ENST00000373401)
No. of Studies 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
MDGA1 MAM domain containing glycosylphosphatidylinositol anchor 1 6p21 1(1/0/0)

SNPs in LD with rs3905219 (count: 0) View in gBrowse (chr6:37641529..37641529 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)