SNP Report

Basic Info

Name	rs3859268 dbSNP Ensembl
Location	chr17:44345895 - 44345895(1)
Variant Alleles	C/T
Ancestral Allele	C
Minor Allele	C
Minor Allele Frequence	0.410543
Functional Annotation	intron_variant; NMD_transcript_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript	intron_variant(ENST00000053867, ENST00000585512, ENST00000586782, ENST00000587109, ENST00000587387, ENST00000587518, ENST00000587958, ENST00000588143, ENST00000588170, ENST00000588237, ENST00000589265, ENST00000589536, ENST00000591740, ENST00000592323, ENST00000592783, ENST00000593167, LRG_661t1); NMD_transcript_variant(ENST00000586782); non_coding_transcript_variant(ENST00000587958, ENST00000588170, ENST00000592323); upstream_gene_variant(ENST00000586443, ENST00000589923, ENST00000590984)
No. of Studies	0 (Positive: 0; Negative: 0; Trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
GRN	granulin	17q21.32	2(2/0/0)

SNPs in LD with rs3859268 (count: 0) View in gBrowse (chr17:44345895..44345895 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)