SNP Report

Basic Info

Name	rs3813498 dbSNP Ensembl
Location	chr6:108622962 - 108622962(1)
Variant Alleles	C/T
Ancestral Allele	T
Minor Allele	C
Minor Allele Frequence	0.338858
Functional Annotation	intron_variant; upstream_gene_variant.
Consequence to Transcript	intron_variant(ENST00000343882, ENST00000406360); upstream_gene_variant(ENST00000434672)
No. of Studies	1 (Positive: 0; Negative: 1; Trend: 0)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Magno, L. A.,2011	C/G		Chi-square tests: genotype: P-value > 0.05; allele: P-value ...... Chi-square tests: genotype: P-value > 0.05; allele: P-value > 0.05 More...	No significant association was observed. No significant association was observed.	Negative

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
SUMO2P8	SUMO2 pseudogene 8	6q21	Mapped by Literature SNP
FOXO3	forkhead box O3	6q21	1(1/0/0)

SNPs in LD with rs3813498 (count: 0) View in gBrowse (chr6:108622962..108622962 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)