SNP Report

Basic Info

Name	rs3808943 dbSNP Ensembl
Location	chr10:60391257 - 60391257(1)
Variant Alleles	C/T
Ancestral Allele	C
Minor Allele	T
Minor Allele Frequence	0.152955
Functional Annotation	intron_variant; NMD_transcript_variant; upstream_gene_variant.
Consequence to Transcript	intron_variant(ENST00000373827, ENST00000503366, ENST00000622427); NMD_transcript_variant(ENST00000622427); upstream_gene_variant(ENST00000280772)
No. of Studies	1 (Positive: 1; Negative: 0; Trend: 0)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Gonzalez SD, 2013			FBAT P-value=0.015, Bonferroni-adjusted P-value=0.087, Z-sco...... FBAT P-value=0.015, Bonferroni-adjusted P-value=0.087, Z-score=2.43 More...	SNPs rs1380455 and rs3808943 were nominally associated with ...... SNPs rs1380455 and rs3808943 were nominally associated with BP; however, the associations did not meet the Bonferroni threshold of significance. More...	Positive

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
ANK3	ankyrin 3, node of Ranvier (ankyrin G)	10q21	17(13/3/1)

SNPs in LD with rs3808943 (count: 0) View in gBrowse (chr10:60391257..60391257 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)