SNP Report

Basic Info

Name	rs3617 dbSNP Ensembl
Location	chr3:52799789 - 52799789(1)
Variant Alleles	C/A
Ancestral Allele	A
Minor Allele	C
Minor Allele Frequence	0.45627
Functional Annotation	downstream_gene_variant; missense_variant; non_coding_transcript_exon_variant; non_coding_transcript_variant; upstream_gene_variant. Polyphen Annotation: benign(ENST00000416872, ENST00000449956, ENST00000621946) SIFT Annotation: tolerated(ENST00000416872, ENST00000449956, ENST00000621946)
Consequence to Transcript	downstream_gene_variant(ENST00000467268); missense_variant(ENST00000416872, ENST00000449956, ENST00000621946); non_coding_transcript_exon_variant(ENST00000463893, ENST00000465243); non_coding_transcript_variant(ENST00000463893, ENST00000465243); upstream_gene_variant(ENST00000464804, ENST00000465314, ENST00000475931, ENST00000495622)
No. of Studies	0 (Positive: 0; Negative: 0; Trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
ITIH3	inter-alpha-trypsin inhibitor heavy chain 3	3p21.1	3(3/0/0)

SNPs in LD with rs3617 (count: 0) View in gBrowse (chr3:52799789..52799789 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)