BDgene

SNP Report

Basic Info
Name rs359895 dbSNP Ensembl
Location chr2:184598458 - 184598458(1)
Variant Alleles T/A
Ancestral Allele T
Minor Allele A
Minor Allele Frequence 0.472843
Functional Annotation 5_prime_UTR_variant.
Consequence to Transcript 5_prime_UTR_variant(ENST00000302277)
No. of Studies 1 (Positive: 0; Negative: 1; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Zhang, C., 2015 A/T allelic P-value=0.18, OR (95 % CI)=1.16 (0.98-1.37); genotyp...... allelic P-value=0.18, OR (95 % CI)=1.16 (0.98-1.37); genotypic P-value=0.44 More... No significant differences were observed. No significant differences were observed. Negative

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
ZNF804A zinc finger protein 804A 2q32.1 6(3/3/0)

SNPs in LD with rs359895 (count: 24) View in gBrowse (chr2:184598458..184674203 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2<=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 24)


Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback Acknowledgements
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Last update: March 31, 2016