BDgene

SNP Report

Basic Info
Name rs35003670 dbSNP Ensembl
Location chr9:114424482 - 114424482(1)
Variant Alleles C/G/T
Ancestral Allele C
Minor Allele Frequence 0.0
Functional Annotation missense_variant.
Polyphen Annotation: benign(ENST00000374059, ENST00000362057' target='_blank'>ENST00000362057); probably damaging(ENST00000265134' target='_blank'>ENST00000265134, ENST00000362057' target='_blank'>ENST00000362057); possibly damaging(ENST00000265134' target='_blank'>ENST00000265134)
SIFT Annotation: tolerated(ENST00000362057' target='_blank'>ENST00000362057, ENST00000374059' target='_blank'>ENST00000374059, ENST00000265134' target='_blank'>ENST00000265134); deleterious(ENST00000374059' target='_blank'>ENST00000374059, ENST00000265134' target='_blank'>ENST00000265134, ENST00000362057' target='_blank'>ENST00000362057)
Consequence to Transcript missense_variant(ENST00000374059, ENST00000362057, ENST00000374059, ENST00000265134, ENST00000265134, ENST00000362057)
No. of Studies 1 (Positive: 0; Negative: 1; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Takata, A.,2011(a) C/G Fisher's exact test: allele P-value = 1, genotype P-value = ...... Fisher's exact test: allele P-value = 1, genotype P-value = 1 More... No significant association was observed in BD. No significant association was observed in BD. Negative

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
DFNB31 deafness, autosomal recessive 31 9q32 3(2/1/0)

SNPs in LD with rs35003670 (count: 0) View in gBrowse (chr9:114424482..114424482 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)