SNP Report

Basic Info

Name	rs34756139 dbSNP Ensembl
Location	chr13:52102139 - 52102139(1)
Variant Alleles	T/G
Ancestral Allele	T
Minor Allele	G
Minor Allele Frequence	0.0720847
Functional Annotation	missense_variant; NMD_transcript_variant. Polyphen Annotation: benign(ENST00000465811); probably damaging(ENST00000355568, ENST00000617045) SIFT Annotation: deleterious(ENST00000355568, ENST00000617045); tolerated(ENST00000465811)
Consequence to Transcript	missense_variant(ENST00000465811, ENST00000355568, ENST00000617045); NMD_transcript_variant(ENST00000465811)
No. of Studies	1 (Positive: 0; Negative: 1; Trend: 0)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Strauss, K. A., 2014	T/G		Bipolar 1 disorder: X²=0.1, FBAT P-value=0.349, E...... Bipolar 1 disorder: X²=0.1, FBAT P-value=0.349, EMMAX P-value=0.543; Bipolar spectrum disorder: X¹¹=0, FBAT P-value=0.722, EMMAX P-value=0.256 More...	No significant associations were observed. No significant associations were observed.	Negative

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
NEK5	NIMA-related kinase 5	13q14.2	1(0/1/0)

SNPs in LD with rs34756139 (count: 0) View in gBrowse (chr13:52102139..52102139 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)