SNP Report

Basic Info

Name	rs346005 dbSNP Ensembl
Location	chr4:52588572 - 52588572(1)
Variant Alleles	A/C
Ancestral Allele	C
Minor Allele	A
Minor Allele Frequence	0.492812
Functional Annotation	downstream_gene_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000441222)
No. of Studies	1 (Positive: 0; Negative: 1; Trend: 0)
Source	Literature
Overlap with SZ?	YES
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Kushima, I.,2010	A/C		Allele-/genotype wise analyses: X² test, allele P...... Allele-/genotype wise analyses: X² test, allele P-value > 0.05; genotype P-value > 0.05 More...	No significant association was observed in BD. No significant association was observed in BD.	Negative

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
USP46	ubiquitin specific peptidase 46	4q12	1(0/1/0)

SNPs in LD with rs346005 (count: 0) View in gBrowse (chr4:52588572..52588572 )

Overlap with SZ from cross-disorder studies (count: 1)

Reference	Statistical Result	Description	Result Category
Kushima, I.,2010	Allele-/genotype wise analyses:X² test, allele P-value > 0.05;genotype P-value > 0.05	No significant association was observed.	Negative

Overlap with MDD from cross-disorder studies (count: 0)