SNP Report

Basic Info

Name	rs2869546 dbSNP Ensembl
Location	chr15:78615003 - 78615003(1)
Variant Alleles	C/T
Ancestral Allele	T
Minor Allele	C
Minor Allele Frequence	0.291334
Functional Annotation	downstream_gene_variant; intron_variant; NMD_transcript_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000559080, ENST00000559941, ENST00000561128); intron_variant(ENST00000326828, ENST00000348639, ENST00000559658); NMD_transcript_variant(ENST00000559658)
No. of Studies	0 (Positive: 0; Negative: 0; Trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
CHRNA3	cholinergic receptor, nicotinic, alpha 3 (neuronal)	15q24	3(1/2/0)

SNPs in LD with rs2869546 (count: 0) View in gBrowse (chr15:78615003..78615003 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)