BDgene

SNP Report

Basic Info
Name rs264826 dbSNP Ensembl
Location chr8:77458426 - 77458426(1)
Variant Alleles A/G
Ancestral Allele G
Minor Allele A
Minor Allele Frequence 0.403554
Functional Annotation intron_variant; non_coding_transcript_variant.
Consequence to Transcript intron_variant(ENST00000518706, ENST00000524014); non_coding_transcript_variant(ENST00000518706, ENST00000524014)
No. of Studies 1 (Positive: 0; Negative: 1; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Djurovic, S.,2010 Combined analysis: for TOP Norway (discovery sample): P-valu...... Combined analysis: for TOP Norway (discovery sample): P-value = 0.00061, OR=1.53; for Iceland (replication sample): P-value = 0.044268, OR=1.15, Stouffer's z value=0.0021 More... No significant association was observed in BD. No significant association was observed in BD. Negative

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
PKIA protein kinase (cAMP-dependent, catalytic) inhibitor alpha 8q21.13 1(0/1/0)

SNPs in LD with rs264826 (count: 19) View in gBrowse (chr8:77428177..77607683 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2<=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 19)


Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback Acknowledgements
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Last update: March 31, 2016