BDgene

SNP Report

Basic Info
Name rs263906 dbSNP Ensembl
Location chr1:101512778 - 101512778(1)
Variant Alleles T/C
Ancestral Allele T
Minor Allele T
Minor Allele Frequence 0.356829
No. of Studies 2 (Positive: 0; Negative: 2; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 2)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Green, E. K.,2012 C/T BD ImmunoChip:P-value = 0.545,OR = 1.034;ImmunoChip, PGC-BD ...... BD ImmunoChip:P-value = 0.545,OR = 1.034;ImmunoChip, PGC-BD combined data:P-balue = 0.000483,OR = 1.074 More... No significant association was observed. No significant association was observed. Negative
Sklar, P.,2011 C/T Primary GWAS P-value(GC)=0.0000242, OR=1.13; replication P-v...... Primary GWAS P-value(GC)=0.0000242, OR=1.13; replication P-value(1-sided)=0.44, OR=1.01; Combined GWAS and replication P-value(GC)=0.000443, OR=1.08 More... No significant association was observed. No significant association was observed. Negative

SNP related genes (count: 0)

SNPs in LD with rs263906 (count: 0) View in gBrowse (chr1:101512778..101512778 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback Acknowledgements
To view this website normally, please make sure to allow Flash to run from the local filesystem in the security settings panel.
Last update: March 31, 2016