BDgene

SNP Report

Basic Info
Name rs2535627 dbSNP Ensembl
Location chr3:52811089 - 52811089(1)
Variant Alleles T/C
Ancestral Allele C
Minor Allele T
Minor Allele Frequence 0.466454
Functional Annotation downstream_gene_variant.
Consequence to Transcript downstream_gene_variant(ENST00000266041, ENST00000406595, ENST00000416872, ENST00000441637, ENST00000449956, ENST00000461966, ENST00000464000, ENST00000468472, ENST00000485816, ENST00000491663, ENST00000493136, ENST00000495622, ENST00000621946)
No. of Studies 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 3)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
ITIH3 inter-alpha-trypsin inhibitor heavy chain 3 3p21.1 3(3/0/0)
ITIH4 inter-alpha-trypsin inhibitor heavy chain family, member 4 3p21.1 Mapped by Literature SNP
MUSTN1 musculoskeletal, embryonic nuclear protein 1 3p21.31 Mapped by Literature SNP

SNPs in LD with rs2535627 (count: 0) View in gBrowse (chr3:52811089..52811089 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)