BDgene

SNP Report

Basic Info
Name rs2368041 dbSNP Ensembl
Location chr3:194082743 - 194082743(1)
Variant Alleles C/A
Ancestral Allele A
Minor Allele A
Minor Allele Frequence 0.3125
Functional Annotation downstream_gene_variant.
Consequence to Transcript downstream_gene_variant(ENST00000615240, ENST00000615650)
No. of Studies 1 (Positive: 0; Negative: 1; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Schosser, A.,2011 chi-square (X2) test: genotype, X2=1.4...... chi-square (X2) test: genotype, X2=1.497, P-value = 0.473; allele, X2=1.21, P-value = 0.271 More... No significant association was observed. No significant association was observed. Negative

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
HES1 hes family bHLH transcription factor 1 3q28-q29 1(0/1/0)

SNPs in LD with rs2368041 (count: 0) View in gBrowse (chr3:194082743..194082743 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)