SNP Report

Basic Info

Name	rs2336542 dbSNP Ensembl
Location	chr3:52676620 - 52676620(1)
Variant Alleles	A/G
Ancestral Allele	G
Minor Allele	G
Minor Allele Frequence	0.320088
Functional Annotation	downstream_gene_variant; intron_variant; NMD_transcript_variant; upstream_gene_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000424867, ENST00000439181, ENST00000458294); intron_variant(ENST00000296302, ENST00000337303, ENST00000356770, ENST00000394830, ENST00000409057, ENST00000409114, ENST00000409767, ENST00000410007, ENST00000412587, ENST00000420148, ENST00000423351, ENST00000431678, ENST00000446103, ENST00000449505, ENST00000450271); NMD_transcript_variant(ENST00000412587); upstream_gene_variant(ENST00000479230)
No. of Studies	0 (Positive: 0; Negative: 0; Trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
GNL3	guanine nucleotide binding protein-like 3 (nucleolar)	3p21.1	2(2/0/0)
PBRM1	polybromo 1	3p21	5(4/0/1)

SNPs in LD with rs2336542 (count: 0) View in gBrowse (chr3:52676620..52676620 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)