SNP Report

Basic Info

Name	rs2306990 dbSNP Ensembl
Location	chr4:186597822 - 186597822(1)
Variant Alleles	C/T
Ancestral Allele	C
Minor Allele	T
Minor Allele Frequence	0.31869
Functional Annotation	downstream_gene_variant; intron_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000503253); intron_variant(ENST00000441802, ENST00000507105, ENST00000507662, ENST00000512347, ENST00000614102); non_coding_transcript_variant(ENST00000507662, ENST00000512347); upstream_gene_variant(ENST00000500085, ENST00000509537, ENST00000509927, ENST00000512772)
No. of Studies	2 (Positive: 1; Negative: 1; Trend: 0)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 2)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Abou Jamra, R, 2008 (a)	C/T		allelic P-value = 0.00248; OR=1.59 allelic P-value = 0.00248; OR=1.59	showed association with bipolar affective disorder showed association with bipolar affective disorder	Positive
Yosifova, A.,2009	C/T		Allelic association: P-value = 0.41 Allelic association: P-value = 0.41	No significant association was observed No significant association was observed	Negative

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
CD36	CD36 molecule (thrombospondin receptor)	7q11.2	3(2/1/0)
FAT1	FAT atypical cadherin 1	4q35.2	Mapped by Literature SNP

SNPs in LD with rs2306990 (count: 0) View in gBrowse (chr4:186597822..186597822 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)