SNP Report

Basic Info

Name	rs2301022 dbSNP Ensembl
Location	chr1:93907322 - 93907322(1)
Variant Alleles	T/C
Ancestral Allele	T
Minor Allele	T
Minor Allele Frequence	0.385383
Functional Annotation	intron_variant; non_coding_transcript_variant.
Consequence to Transcript	intron_variant(ENST00000370238, ENST00000462183, ENST00000467772, ENST00000615724); non_coding_transcript_variant(ENST00000462183, ENST00000467772)
No. of Studies	1 (Positive: 0; Negative: 0; Trend: 1)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Fullerton, J. M.,2010		T	Allelic association: BD patients vs.166 controls: under both...... Allelic association: BD patients vs.166 controls: under both the narrow (allelic P-value = 0.0076, genotypic P-value = 0.032) and broad models (allelic P-value = 0.0308, genotypic P-value = 0.102); BD patients vs.392 controls: X²=1.33, P-value = 0.249, OR=1.142 for broad model; X²=2.727, P-value = 0.099, OR=1.23 More...	This allele frequency difference revealed population stratif...... This allele frequency difference revealed population stratification. More...	Trend

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
GCLM	glutamate-cysteine ligase, modifier subunit	1p21	1(0/0/1)

SNPs in LD with rs2301022 (count: 0) View in gBrowse (chr1:93907322..93907322 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)