SNP Report

Basic Info

Name	rs2287162 dbSNP Ensembl
Location	chr12:106987127 - 106987127(1)
Variant Alleles	G/C
Ancestral Allele	G
Minor Allele	G
Minor Allele Frequence	0.360224
Functional Annotation	5_prime_UTR_variant; downstream_gene_variant; non_coding_transcript_exon_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript	5_prime_UTR_variant(ENST00000240050, ENST00000392830); downstream_gene_variant(ENST00000008527, ENST00000552790); non_coding_transcript_exon_variant(ENST00000547115); non_coding_transcript_variant(ENST00000547115); upstream_gene_variant(ENST00000548101, ENST00000550496, ENST00000550736, ENST00000552029)
No. of Studies	0 (Positive: 0; Negative: 0; Trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
CRY1	cryptochrome circadian clock 1	12q23-q24.1	2(1/1/0)
MTERFD3	mitochondrial transcription termination factor 2	12q24.1	Mapped by Literature SNP

SNPs in LD with rs2287162 (count: 0) View in gBrowse (chr12:106987127..106987127 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)