BDgene

SNP Report

Basic Info
Name rs2276913 dbSNP Ensembl
Location chr4:186151846 - 186151846(1)
Variant Alleles A/G
Ancestral Allele A
Minor Allele A
Minor Allele Frequence 0.164537
Functional Annotation downstream_gene_variant; intron_variant; non_coding_transcript_variant.
Consequence to Transcript downstream_gene_variant(ENST00000508379); intron_variant(ENST00000227065, ENST00000356371, ENST00000389354, ENST00000502970, ENST00000503432, ENST00000504330, ENST00000509574, ENST00000510790, ENST00000513030, ENST00000513212, ENST00000514153, ENST00000514829, ENST00000515078); non_coding_transcript_variant(ENST00000513030, ENST00000513212, ENST00000514829, ENST00000515078)
No. of Studies 1 (Positive: 0; Negative: 1; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Blair, I. P.,2005 G/A X2 goodness of fit tests: MAF=0.14, Genotype P-va...... X2 goodness of fit tests: MAF=0.14, Genotype P-value = 0.59, Allele P-value = 0.9 More... No significant association was observed. No significant association was observed. Negative

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
FAM149A family with sequence similarity 149, member A 4q35.1 1(0/1/0)

SNPs in LD with rs2276913 (count: 0) View in gBrowse (chr4:186151846..186151846 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)