SNP Report

Basic Info

Name	rs2271960 dbSNP Ensembl
Location	chr3:49840645 - 49840645(1)
Variant Alleles	T/C
Ancestral Allele	C
Minor Allele	C
Minor Allele Frequence	0.392772
Functional Annotation	downstream_gene_variant; intron_variant; NMD_transcript_variant; upstream_gene_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000473863, ENST00000477546, ENST00000482243, ENST00000488860, ENST00000489948); intron_variant(ENST00000331456, ENST00000469027, ENST00000473195, ENST00000482582); NMD_transcript_variant(ENST00000473195); upstream_gene_variant(ENST00000475495)
No. of Studies	0 (Positive: 0; Negative: 0; Trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
TRAIP	TRAF interacting protein	3p21.31	1(0/0/1)

SNPs in LD with rs2271960 (count: 0) View in gBrowse (chr3:49840645..49840645 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)