BDgene

SNP Report

Basic Info
Name rs2271309 dbSNP Ensembl
Location chr17:39628737 - 39628737(1)
Variant Alleles G/A
Ancestral Allele G
Minor Allele G
Minor Allele Frequence 0.483826
Functional Annotation intron_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript intron_variant(ENST00000254079, ENST00000394265, ENST00000394267, ENST00000579000, ENST00000580772, ENST00000580825, ENST00000582680); non_coding_transcript_variant(ENST00000580772); upstream_gene_variant(ENST00000492037, ENST00000580029, ENST00000583446)
No. of Studies 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
PPP1R1B protein phosphatase 1, regulatory (inhibitor) subunit 1B 17q12 1(0/1/0)

SNPs in LD with rs2271309 (count: 0) View in gBrowse (chr17:39628737..39628737 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)