BDgene

SNP Report

Basic Info
Name rs2267665 dbSNP Ensembl
Location chr6:35401714 - 35401714(1)
Variant Alleles A/G
Ancestral Allele G
Minor Allele A
Minor Allele Frequence 0.148762
Functional Annotation intron_variant.
Consequence to Transcript intron_variant(ENST00000311565, ENST00000337400, ENST00000360694, ENST00000418635, ENST00000448077)
No. of Studies 1 (Positive: 1; Negative: 0; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Zandi, P. P, 2008 (a) G/A Allelic P-value < .001 Allelic P-value < .001 In the initial analysis, the most significantly associated S...... In the initial analysis, the most significantly associated SNP was rs2267665 in PPARD. This remained significant at P=.05 by permutation after accounting for all SNPs tested. More... Positive

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
PPARD peroxisome proliferator-activated receptor delta 6p21.2 1(1/0/0)

SNPs in LD with rs2267665 (count: 7) View in gBrowse (chr6:35401307..35435008 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2<=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 7)


Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)