SNP Report

Basic Info

Name	rs2241940 dbSNP Ensembl
Location	chr11:20600804 - 20600804(1)
Variant Alleles	G/A
Ancestral Allele	A
Minor Allele	A
Minor Allele Frequence	0.421326
Functional Annotation	intron_variant; NMD_transcript_variant.
Consequence to Transcript	intron_variant(ENST00000298923, ENST00000525748); NMD_transcript_variant(ENST00000298923)
No. of Studies	1 (Positive: 0; Negative: 1; Trend: 0)
Source	Literature
Overlap with SZ?	YES
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Jamra, R. A., 2006 (b)			data not shown data not shown	In the single-marker analysis, none of the analyzed variants...... In the single-marker analysis, none of the analyzed variants revealed a significant association with disease. More...	Negative

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
SLC6A5	solute carrier family 6 (neurotransmitter transporter), member 5	11p15.1	1(0/1/0)

SNPs in LD with rs2241940 (count: 0) View in gBrowse (chr11:20600804..20600804 )

Overlap with SZ from cross-disorder studies (count: 1)

Reference	Statistical Result	Description	Result Category
Jamra, R. A., 2006 (b)	data not shown	In the single-marker analysis, none of the analyzed variants revealed a significant association with disease.	Negative

Overlap with MDD from cross-disorder studies (count: 0)