BDgene

SNP Report

Basic Info
Name rs2239316 dbSNP Ensembl
Location chr16:3863994 - 3863994(1)
Variant Alleles A/G
Ancestral Allele G
Minor Allele G
Minor Allele Frequence 0.373203
Functional Annotation intron_variant.
Consequence to Transcript intron_variant(ENST00000262367, ENST00000382070)
No. of Studies 1 (Positive: 0; Negative: 1; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? YES

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Crisafulli, C.,2012 A/G Association analysis: genotype P-value = 0.34, chi square=4....... Association analysis: genotype P-value = 0.34, chi square=4.56; allele P-value = 0.2, chi square=3.18 More... No significant association was observed in BD. No significant association was observed in BD. Negative

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
CREBBP CREB binding protein 16p13.3 1(0/1/0)

SNPs in LD with rs2239316 (count: 0) View in gBrowse (chr16:3863994..3863994 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 1)
Reference Statistical Result Description Result Category
Crisafulli, C.,2012 Association analysis:genotype P-value = >0.05;allele P-value > 0.05 No significant association was observed in MDD. Negative