BDgene

SNP Report

Basic Info
Name rs2235147 dbSNP Ensembl
Location chr22:35268334 - 35268334(1)
Variant Alleles T/C
Ancestral Allele C
Minor Allele T
Minor Allele Frequence 0.442292
Functional Annotation downstream_gene_variant; intron_variant; NMD_transcript_variant.
Consequence to Transcript downstream_gene_variant(ENST00000420166, ENST00000455359, ENST00000464480, ENST00000498325); intron_variant(ENST00000216106, ENST00000418170); NMD_transcript_variant(ENST00000418170)
No. of Studies 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
HMGXB4 HMG box domain containing 4 22q13 1(1/0/0)

SNPs in LD with rs2235147 (count: 0) View in gBrowse (chr22:35268334..35268334 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)