BDgene

SNP Report

Basic Info
Name rs2190242 dbSNP Ensembl
Location chr7:30669859 - 30669859(1)
Variant Alleles C/A
Ancestral Allele A
Minor Allele C
Minor Allele Frequence 0.327676
Functional Annotation intron_variant; NMD_transcript_variant.
Consequence to Transcript intron_variant(ENST00000341843, ENST00000348438, ENST00000452278, ENST00000471646, ENST00000506074); NMD_transcript_variant(ENST00000452278)
No. of Studies 1 (Positive: 1; Negative: 0; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Ceulemans, S.,2011 C/A Single SNP analyses: Permuted P-value = 0.02559, Odds Ratio=...... Single SNP analyses: Permuted P-value = 0.02559, Odds Ratio=0.7202 More... Significant associations were found . Significant associations were found . Positive

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
CRHR2 corticotropin releasing hormone receptor 2 7p14.3 3(2/1/0)

SNPs in LD with rs2190242 (count: 0) View in gBrowse (chr7:30669859..30669859 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)