BDgene

SNP Report

Basic Info
Name rs2166619 dbSNP Ensembl
Location chr13:42070543 - 42070543(1)
Variant Alleles C/T
Ancestral Allele T
Minor Allele C
Minor Allele Frequence 0.0694888
Functional Annotation downstream_gene_variant; intron_variant; non_coding_transcript_exon_variant; non_coding_transcript_variant.
Consequence to Transcript downstream_gene_variant(ENST00000611224); intron_variant(ENST00000261491, ENST00000337343, ENST00000379274); non_coding_transcript_exon_variant(ENST00000403865); non_coding_transcript_variant(ENST00000403865)
No. of Studies 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
DGKH diacylglycerol kinase, eta 13q13.3 6(3/3/0)
MAPK6PS3 mitogen-activated protein kinase 6 pseudogene 3 13q14.13 Mapped by Literature SNP

SNPs in LD with rs2166619 (count: 0) View in gBrowse (chr13:42070543..42070543 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)