SNP Report

Basic Info

Name	rs2148656 dbSNP Ensembl
Location	chr13:42065716 - 42065716(1)
Variant Alleles	C/T
Ancestral Allele	T
Minor Allele	C
Minor Allele Frequence	0.290335
Functional Annotation	downstream_gene_variant; intron_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000403865); intron_variant(ENST00000261491, ENST00000337343, ENST00000379274, ENST00000611224)
No. of Studies	1 (Positive: 0; Negative: 1; Trend: 0)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Tesli, M.,2009			Single marker association: MAF=0.32, HWE=0.81, P-value(MAX t...... Single marker association: MAF=0.32, HWE=0.81, P-value(MAX test)=0.86 More...	No significant association was observed No significant association was observed	Negative

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
DGKH	diacylglycerol kinase, eta	13q13.3	6(3/3/0)
MAPK6PS3	mitogen-activated protein kinase 6 pseudogene 3	13q14.13	Mapped by Literature SNP

SNPs in LD with rs2148656 (count: 0) View in gBrowse (chr13:42065716..42065716 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)