SNP Report

Basic Info

Name	rs2111902 dbSNP Ensembl
Location	chr12:108884971 - 108884971(1)
Variant Alleles	T/G
Ancestral Allele	G
Minor Allele	G
Minor Allele Frequence	0.487819
Functional Annotation	downstream_gene_variant; intron_variant; NMD_transcript_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000548052); intron_variant(ENST00000228476, ENST00000547122, ENST00000547166, ENST00000547768, ENST00000549215, ENST00000551281); NMD_transcript_variant(ENST00000547122, ENST00000549215)
No. of Studies	2 (Positive: 0; Negative: 2; Trend: 0)
Source	Literature
Overlap with SZ?	YES
Overlap with MDD?	NO

SNP related studies (count: 2)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Bass, N. J.,2009	A/C		chi-squared tests: for BP, allele, P-value > 0.05 chi-squared tests: for BP, allele, P-value > 0.05	No significant association was observed. No significant association was observed.	Negative
Prata, D., 2008			data not shown data not shown	Analysis of each SNP individually showed no significant asso...... Analysis of each SNP individually showed no significant association. More...	Negative

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
DAOA	D-amino acid oxidase activator	13q33.2	21(13/7/1)
DAO	D-amino-acid oxidase	12q24.11	5(1/4/0)

SNPs in LD with rs2111902 (count: 0) View in gBrowse (chr12:108884971..108884971 )

Overlap with SZ from cross-disorder studies (count: 1)

Reference	Statistical Result	Description	Result Category
Bass, N. J.,2009	chi-squared tests:for SCZ, allele, X²(1 d.f.)=0.025, P-value = 0.875	No significant association was observed.	Negative

Overlap with MDD from cross-disorder studies (count: 0)