BDgene

SNP Report

Basic Info
Name rs2071506 dbSNP Ensembl
Location chr3:52792260 - 52792260(1)
Variant Alleles T/C
Ancestral Allele C
Minor Allele C
Minor Allele Frequence 0.399161
Functional Annotation downstream_gene_variant; upstream_gene_variant.
Consequence to Transcript downstream_gene_variant(ENST00000273283, ENST00000405128, ENST00000428133, ENST00000482836, ENST00000484844, ENST00000494705, ENST00000537050, ENST00000628722); upstream_gene_variant(ENST00000416872, ENST00000449956, ENST00000467268, ENST00000621946)
No. of Studies 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
ITIH3 inter-alpha-trypsin inhibitor heavy chain 3 3p21.1 3(3/0/0)
ITIH1 inter-alpha-trypsin inhibitor heavy chain 1 3p21.1 1(1/0/0)

SNPs in LD with rs2071506 (count: 0) View in gBrowse (chr3:52792260..52792260 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)