BDgene

SNP Report

Basic Info
Name rs2019065 dbSNP Ensembl
Location chr3:52775509 - 52775509(1)
Variant Alleles T/C
Ancestral Allele C
Minor Allele C
Minor Allele Frequence 0.419728
Functional Annotation upstream_gene_variant.
Consequence to Transcript upstream_gene_variant(ENST00000233027, ENST00000273283, ENST00000383721, ENST00000461689, ENST00000478667, ENST00000480409, ENST00000487686, ENST00000494603, ENST00000496822, ENST00000535191, ENST00000537050, ENST00000628722)
No. of Studies 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
ITIH1 inter-alpha-trypsin inhibitor heavy chain 1 3p21.1 1(1/0/0)
NEK4 NIMA-related kinase 4 3p21.1 1(1/0/0)

SNPs in LD with rs2019065 (count: 0) View in gBrowse (chr3:52775509..52775509 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)