BDgene

SNP Report

Basic Info
Name rs2012887 dbSNP Ensembl
Location chr13:105517256 - 105517256(1)
Variant Alleles T/C
Ancestral Allele C
Minor Allele C
Minor Allele Frequence 0.383986
No. of Studies 2 (Positive: 0; Negative: 2; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 2)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Hattori, E.,2003 C/T C Association analysis: for CNG pedigrees, TDT P-value = 0.17,...... Association analysis: for CNG pedigrees, TDT P-value = 0.17, Transmission Ratio=0.58 More... No significant association was observed in BD. No significant association was observed in BD. Negative
Maheshwari, M.,2009 C/T TDT: Raw TDT P-value = 0.829, Adaptive permutation corrected...... TDT: Raw TDT P-value = 0.829, Adaptive permutation corrected P-value = 0.308 More... No significant allelic association with BP was found No significant allelic association with BP was found Negative

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
DAOA D-amino acid oxidase activator 13q33.2 21(13/7/1)

SNPs in LD with rs2012887 (count: 0) View in gBrowse (chr13:105517256..105517256 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback Acknowledgements
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Last update: March 31, 2016