SNP Report

Basic Info

Name	rs1961958 dbSNP Ensembl
Location	chr3:52551974 - 52551974(1)
Variant Alleles	A/G
Ancestral Allele	A
Minor Allele	G
Minor Allele Frequence	0.31889
Functional Annotation	downstream_gene_variant; intron_variant; NMD_transcript_variant; upstream_gene_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000423351); intron_variant(ENST00000296302, ENST00000337303, ENST00000356770, ENST00000394830, ENST00000409057, ENST00000409114, ENST00000409767, ENST00000410007, ENST00000412587, ENST00000476842); NMD_transcript_variant(ENST00000412587); upstream_gene_variant(ENST00000516959)
No. of Studies	0 (Positive: 0; Negative: 0; Trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 3)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
RNU6-856P	RNA, U6 small nuclear 856, pseudogene	3p21.1	Mapped by Literature SNP
SMIM4	small integral membrane protein 4	3p21.1	Mapped by Literature SNP
PBRM1	polybromo 1	3p21	5(4/0/1)

SNPs in LD with rs1961958 (count: 0) View in gBrowse (chr3:52551974..52551974 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)