SNP Report

Basic Info

Name	rs1951521 dbSNP Ensembl
Location	chr14:100277084 - 100277084(1)
Variant Alleles	G/A
Ancestral Allele	A
Minor Allele	G
Minor Allele Frequence	0.3752
Functional Annotation	downstream_gene_variant; intron_variant; non_coding_transcript_exon_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000553625, ENST00000553954); intron_variant(ENST00000262238, ENST00000554579, ENST00000554804); non_coding_transcript_exon_variant(ENST00000623799); non_coding_transcript_variant(ENST00000554579, ENST00000623799); upstream_gene_variant(ENST00000636393)
No. of Studies	1 (Positive: 0; Negative: 1; Trend: 0)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Gonzalez, S., 2014			Test for linkage:Â LOD=0.55,Â P-value=0.47;Â Test for associ...... Test for linkage:Â LOD=0.55,Â P-value=0.47;Â Test for association:Â LOD=0.66,Â P-value=0.081;Â Test for other linked variants:Â LOD=0.83,Â P-value=0.146 More...	No significant associations were observed. No significant associations were observed.	Negative

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
YY1	YY1 transcription factor	14q	1(0/1/0)

SNPs in LD with rs1951521 (count: 0) View in gBrowse (chr14:100277084..100277084 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)