BDgene

SNP Report

Basic Info
Name rs1933988 dbSNP Ensembl
Location chr6:132550514 - 132550514(1)
Variant Alleles A/C
Ancestral Allele C
Minor Allele C
Minor Allele Frequence 0.342652
Functional Annotation upstream_gene_variant.
Consequence to Transcript upstream_gene_variant(ENST00000275200)
No. of Studies 1 (Positive: 0; Negative: 1; Trend: 0)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Liu, C., 2007 A/C TDT P-value = 0.67 in CNG+NIMH waves I+2 TDT P-value = 0.67 in CNG+NIMH waves I+2 Negative

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
TAAR8 trace amine associated receptor 8 6q23.2 1(0/1/0)

SNPs in LD with rs1933988 (count: 0) View in gBrowse (chr6:132550514..132550514 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback Acknowledgements
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Last update: March 31, 2016