SNP Report

Basic Info

Name	rs17222218 dbSNP Ensembl
Location	chr8:20179308 - 20179308(1)
Variant Alleles	C/G
Ancestral Allele	C
Minor Allele	G
Minor Allele Frequence	0.0181709
Functional Annotation	missense_variant; NMD_transcript_variant; upstream_gene_variant. Polyphen Annotation: benign(ENST00000276373, ENST00000381608, ENST00000437980, ENST00000440926, ENST00000522513); possibly damaging(ENST00000265808, ENST00000517776, ENST00000519026) SIFT Annotation: tolerated(ENST00000276373, ENST00000381608, ENST00000437980, ENST00000440926, ENST00000522513, ENST00000265808, ENST00000517776, ENST00000519026)
Consequence to Transcript	missense_variant(ENST00000276373, ENST00000381608, ENST00000437980, ENST00000440926, ENST00000522513, ENST00000265808, ENST00000517776, ENST00000519026); NMD_transcript_variant(ENST00000517776); upstream_gene_variant(ENST00000524272)
No. of Studies	1 (Positive: 0; Negative: 0; Trend: 1)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Lohoff, F. W., 2013			no P-value no P-value	DNA Sanger sequencing of BPD patients identified several nov...... DNA Sanger sequencing of BPD patients identified several novel and rare variants. More...	Trend

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
SLC18A1	solute carrier family 18 (vesicular monoamine transporter), member 1	8p21.3	3(2/1/0)

SNPs in LD with rs17222218 (count: 0) View in gBrowse (chr8:20179308..20179308 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)